Faculty Introduction
’92.3.-’00.2. BSc. in Aquatic Life Medicine, Pukyong National University, Busan, KOREA
’00.3.-’02.8. MSc. in Aquatic Life Medicine Pukyong National University, Busan, KOREA
’02.9.-’06.6. Ph.D. Microbiology, Heriot-Watt University, Edinburgh, UK
’07.04.-’07.08. Assistance professor, Department of Aqualife Medicine of Chonnam National University, Yeosu, KOREA
’07.10.-’13.08. Assistance professor, Department of Aqualife Medicine of Chonnam National University, Yeosu, KOREA
’13.09.- ’19.08. Associate professor, Department of Aquatic Life Medicine, College of Fisheries Sciences of Pukyong National University, Busan 608-737, KOREA
’15.08.- ’16.09. Director, Control Center for Aquatic Animal Diseases, Pukyong National University
’16.09.- ’20.08. Associate Dean, College of Fisheries Sciences of Pukyong National University, Busan 608-737, KOREA
’18.01.- now Editor, The Korean Society of Fish Pathology
’18.11.- now Member, Fisheries and Animal Pharmacology Review Committee, National Fishery Products Quality Manvgement Service
’19.01.- now Editor of The Korean Society of Fisheries and Aquatic Science
’19.09.- now Professor, Department of Aquatic Life Medicine, College of Fisheries Sciences of Pukyong National University, Busan 608-737, KOREA
’21.08.- now Member, Committee of Ministry of Oceans and Fisheries
’22.05.- now Associate Editor, Frontiers in Marine Sciences
’22.09.- now Member, Committee of Ministry of Food and Drug Safety
1. Understanding of host-pathogen interactions using multi-omics approaches
2. Eco-friendly preventive methods: application of probiotics to aquatic animals
3. Antibiotic resistance (genes and susceptibility test) and chemotherapy
4. Molecular diagnostics of aquatic animal diseases
5. Import Risk Analysis
Introduction to Aquatic Life Medicine
Introduction to Immunology
Aquatic Microbiology & Lab Ⅰ
Aquatic Microbiology & Lab Ⅱ
Aquatic Disease Prophylaxis & Lab
Introduction to Immunology
Aquatic Microbiology & Lab Ⅰ
Aquatic Microbiology & Lab Ⅱ
Aquatic Disease Prophylaxis & Lab
Graduate Student Recruitment
Our lab is seeking passionate students for Master’s, PhD, or Integrated Master’s-PhD programs. We focus on aquatic animal health, microbiomes, and sustainable aquaculture, including:
- Profiling and manipulating microbiomes in aquaculture systems.- Exploring probiotics and bacteriophages.
- Developing diagnostics for aquatic pathogens.
- Investigating host-pathogen interactions using multi-omics.
Eligibility
- Degree in a relevant field (e.g., aquaculture, veterinary science, biology, microbiology, etc.).
- Interest in aquatic science and strong communication skills in English.
How to Apply
Email [dhkim@pknu.ac.kr] with:
- A cover letter.- CV.
- Academic transcripts.
- Contact information for references.
Book
Thanh Luan Nguyen et al.(2022) Modes of Action of Probiotics, Pages 239-262, Springer Nature Switzerland AG
Kim et al. (2017) Chapter 5. Modern methods of diagnosis in Diagnosis and control of Diseases of Fish and Shellfish. Wiley.
김도형 역 (2014). 관상어 관리 매뉴얼 (The Manual of Fish Health), ㈜바이오사이언스출판
Paper(2020~)
https://scholar.google.com/citations?user=HDMC_B8AAAAJ&hl=ko&oi=ao
2023
| Author | Year of Publication | Title | Journal |
|---|---|---|---|
| Lee et al. | 2023 | Mechanisms underlying probiotic effects on neurotransmission and stress resilience in fish via transcriptomic profiling | Fish & Shellfish Immunology, 141, 109063 |
| Lee et al. | 2023 | Serotype distribution and antibiogram of Streptococcus parauberis isolated from fish in South Korea | Microbiology Spectrum, e04400-22 |
| Kim et al. | 2023 | A multiplex real-time polymerase chain reaction (qPCR) kit targeting VP664 and VP28 genes of white spot syndrome virus (WSSV) | Aquaculture, 577, 739968 |
| Park et al. | 2023 | β-Asarone Alleviates High-Glucose-Induced Oxidative Damage via Inhibition of ROS Generation and Inactivation of the NF-κB/NLRP3 Inflammasome Pathway in Human Retinal Pigment Epithelial Cells | Antioxidants, 12(7), 1410 |
| Lee et al. | 2023 | Molecular mechanisms underlying the vulnerability of Pacific abalone (Haliotis discus hannai) to Vibrio harveyi infection at higher water temperature | Fish & Shellfish Immunology, 138, 108844 |
| Ho et al. | 2023 | Development of a rapid and sensitive real-time diagnostic assay to detect and quantify Aphanomyces invadans, the causative agent of epizootic ulcerative syndrome | Plos one, 18(6), e0286553 |
| Kim et al. | 2023 | Photothermally controlled drug release of naproxen-incorporated mungbean starch/PVA biomaterials adding melanin nanoparticles | Process Biochemistry, 129, 268-280 |
| Lee et al. | 2023 | Optimization of green LED light intensity for accelerating wound healing in olive flounder Paralichthys olivaceus (Temminck et Schlegel) | Aquaculture, 569, 739344 |
| Pham et al. | 2023 | Wide-genome selection of lactic acid bacteria harboring genes that promote the elimination of antinutritional factors | Frontiers in Plant Science, 14, 1145041 |
| Pham et al. | 2023 | Prevalence and antibiotic resistance of Aeromonas schubertii causing internal white spot disease on snakehead fish, Channa striata, in the Mekong Delta, Vietnam | Journal of the World Aquaculture Society, 1-17 |
| Lee et al. | 2023 | Complete Genome Sequences of Streptococcus parauberis Serotype Ia, Ib/Ic, and II Isolates from Diseased Olive Flounder in South Korea | Microbiology Resource Announcements, 12(2), e01058-22 |
| Ho et al. | 2023 | Complete Genomic Sequences of Two Aeromonas hydrophila Isolates Derived from Diseased Fish in South Korea | Announcements, 12(1), e00786-22 |
| Lee et al. | 2023 | Downregulated miR-15b-5p induces suppressor of cytokine signaling 6 (SOCS6) expression during viral hemorrhagic septicemia virus infection in olive flounder (Paralichthys olivaceus) | Aquaculture, 562, 738811 |
| Woo et al. | 2023 | Molecular characterization and expression of CD96 in red seabream (Pagrus major) | Fisheries and Aquatic Sciences, 26(2), 97-104 |
| Lee et al. | 2023 | Development of rapid neutralization assay of viral hemorrhagic septicemia virus (VHSV) based on chimeric rhabdovirus expressing heterologous glycoprotein | Journal of Virological Methods, 311, 114639 |
| Sohn et al. | 2023 | First report of L1 cell adhesion molecule (L1CAM) in flat fish (Starry flounder): Molecular features and expression analysis | Developmental & Comparative Immunology. 105054 |
2022
| Author | Year of Publication | Title | Journal |
|---|---|---|---|
| Lee et al. | 2022 | The complete genome sequence of a white spot syndrome virus isolated from Litopenaeus vannamei | Journal of fish pathology, 35(1), 129-133 |
| Kim et al. | 2022 | Analysis of Behavioral Changes in Angelfish (Pterophyllum scalare) Infected with Bacterial Pathogens using Video Tracking | Journal of fish pathology, 35(2), 205-214 |
| Kang et al. | 2022 | Anti-scuticociliate effects of a combined treatment with formalin and blue LED | Journal of fish pathology, 35(1), 113~120 |
| Park et al. | 2022 | Physiological and Histological Changes of Overfeeding-induced Obese Rainbow Trout Oncorhynchus mykiss | Fisheries and Aquatic Sciences, 55(5), 688-696 |
| Ho et al. | 2022 | Potential harmful effects of viral hemorrhagic septicemia virus in mammals | Fisheries and Aquatic Sciences, 25(6), 320-326 |
| Lee et al. | 2022 | NMR-based metabolomics revealed metabolic changes in energy production for viral replication and immunological response in rock bream (Oplegnathus fasciatus) tissues during rock bream iridovirus (RBIV) infection | Aquaculture , 547, 737451 |
| Osman et al. | 2022 | Molecular approaches for detection and quantification of Vibrio scophthalmi based on recA. | Journal of Fish Diseases, 45(2), 373-378 |
| Roh et al. | 2022 | Identification, classification and functional characterization of HSP70s in rainbow trout (Oncorhynchus mykiss) through multi-omics approaches. | Fish & Shellfish Immunology, 121, 205-214 |
| Roh et al. | 2022 | Eukaryotic and prokaryotic microbiome profiles of incoming seawater treated with electrolytic mixed oxidants used in a land-based fish farm | Aquaculture , 549, 737728 |
| Kim et al. | 2022 | Whole-Genome Sequences of Three Edwardsiella piscicida Isolates from Diseased Fish in South Korea | Microbiology Resource Announcements, 11(5), e00097-22 |
| Shyam et al. | 2022 | Antibody-based lateral flow chromatographic assays for detecting fish and shrimp pathogens: A technical review | Aquaculture,558, 738345 |
| Sohn et al. | 2022 | Molecular characterization and expression analysis of septin gene family and phagocytic function of recombinant septin 2, 3 and 8 of starry flounder (Platichthys stellatus) | Fish & Shellfish Immunology, 126, 251-262 |
| Park et al. | 2022 | Downregulated pol-miR-140-3p induces the expression of the kinesin family member 5A against Streptococcus parauberis infection in olive flounder | Fish & Shellfish Immunology, 126, 178-186 |
| Lee et al. | 2022 | Hepcidin-1 in olive flounder (Paralichthys olivaceus): Gene expression, antimicrobial and therapeutic effects of synthetic peptides against bacterial and viral infections | Aquaculture, 560, 738480 |
| Kim et al. | 2022 | Red Sea Bream Iridovirus (RSIV) Kinetics in Rock Bream (Oplegnathus fasciatus) at Various Fish-Rearing Seawater Temperatures | Animals, 12(15), 1978 |
| Joo et al. | 2022 | Red sea bream interleukin (IL)-1β and IL-8 expression, subcellular localization, and antiviral activity against red sea bream iridovirus (RSIV) | Fish & Shellfish Immunology, 128, 360-370 |
| Roh et al. | 2022 | Identification, classification and functional characterization of HSP70s in rainbow trout (Oncorhynchus mykiss) through multi-omics approaches | Fish & Shellfish Immunology, 121, 205-214 |
| Kim et al. | 2022 | Development and Validation of a Quantitative Polymerase Chain Reaction Assay for the Detection of Red Sea Bream Iridovirus | Fishes, 7(5), 236 |
| Lee et al. | 2022 | Effect of lincomycin, an injectable lincosamide antibiotic, against streptococcosis in cultured olive flounder Paralichthys olivaceus and its pharmacokinetic-pharmacodynamic profile | Aquaculture, 548, 737667 |
2021
| Author | Year of Publication | Title | Journal |
|---|---|---|---|
| Ji et al. | 2021 | Suppression of lipopolysaccharide-induced inflammatory and oxidative response by 5-aminolevulinic acid in RAW 264.7 macrophages and zebrafish larvae | Biomolecules & Therapeutics, 29(6), 685 |
| Ko et al. | 2021 | Proteome profile of spleen in rock bream (Oplegnathus fasciatus) naturally infected with rock bream iridovirus (RBIV) | Genes & Genomics, 43(11), 1259-1268 |
| Choi et al. | 2021 | First report of eosinophil peroxidase in starry flounder (Platichthys stellatus): Gene identification and gene expression profiling | Fish & Shellfish Immunology, 118, 155-159 |
| Roh et al. | 2021 | Dual-organ transcriptomic analysis of rainbow trout infected with Ichthyophthirius multifiliis through co-expression and machine learning | Frontiers in Immunology, 12, 677730 |
| Lee et al. | 2021 | Differential proteome profile of gill and spleen in three pathogen-infected Paralichthys olivaceus | Genes & Genomics, 43, 701-712 |
| Roh et al. | 2021 | Genotypic and phenotypic characterization of highly alkaline-resistant Carnobacterium maltaromaticum V-type ATPase from the dairy product based on comparative genomics | Microorganisms, 9(6), 1233 |
| Park et al. | 2021 | Immunostimulatory effect of ethanol extract of Chondracanthus tenellus in RAW 264.7 macrophages in vitro | Asian Pacific Journal of Tropical Biomedicine, 11(6), 263 |
| Lee et al. | 2021 | Transcriptome analysis unveils survival strategies of Streptococcus parauberis against fish serum | Plos one, 16(5), e0252200 |
| Lee et al. | 2021 | Replication of heterologous glycoprotein-expressing chimeric recombinant snakehead rhabdoviruses (rSHRVs) and viral hemorrhagic septicemia viruses (rVHSVs) at different temperatures | Virus Research, 297, 198392 |
| Roh et al. | 2021 | Cell proliferation and wound healing effects of LEDs in the olive flounder, Paralichthys olivaceus | Aquaculture, 535, 736344 |
| Park et al. | 2021 | Complete Genome Analysis of Flavobacterium psychrophilum Strain FPRT1, Isolated from Diseased Rainbow Trout (Oncorhynchus mykiss) in South Korea | Microbiology Resource Announcements, 10(12) 10-1128 |
| Seo et al. | 2021 | Estimation of pharmacological properties of ceftiofur, an injectable cephalosporin antibiotic, for treatment of streptococcosis in cultured olive flounder Paralichthys olivaceus | Aquaculture Research, 52(2) 831-841 |
| Kim et al. | 2021 | Effects of wheat flour and culture period on bacterial community composition in digestive tracts of Litopenaeus vannamei and rearing water in biofloc aquaculture system | Aquaculture, 531, 735908 |
| Kang et al. | 2021 | Complete genome sequence of Aeromonas salmonicida subsp. masoucida Strain BR19001YR, Isolated from Diseased Korean Rockfish (Sebastes schlegelii) | Microbiology Resource Announcements, 10(3), 10-1128 |
| Choi et al. | 2021 | Molecular identification and mrna expression profiles of galectin-9 gene in red sea bream (Pagrus major) infected with pathogens | Animals, 11(1), 139 |
| Kim et al. | 2021 | Analysis and Prediction of Behavioral Changes in Angelfish Pterophyllum scalare Under Stress Conditions | Korean Journal of Fisheries and Aquatic Sciences, 54(6), 965-973 |
| Lee et al. | 2021 | Case report: Mass mortality of olive flounder (Paralichthys olivaceus) caused by acute gas bubble disease | Journal of fish pathology, 34(2), 255-259 |
2020
| Author | Year of Publication | Title | Journal |
|---|---|---|---|
| Roh et al. | 2020 | Multi-Omics Analysis Provides Novel Insight into Immuno-Physiological Pathways and Development of Thermal Resistance in Rainbow Trout Exposed to Acute Thermal Stress | International journal of molecular sciences, 21(23), 9198 |
| Choi et al. | 2020 | Functional characterization and gene expression profile of perforin-2 in starry flounder (Platichthys stellatus) | Fish & Shellfish Immunology, 107, 511-518 |
| Roh et al. | 2020 | Genome-wide comparison of Carnobacterium maltaromaticum derived from diseased fish harbouring important virulence-related genes | Journal of fish diseases, 43(9), 1029-1037 |
| Roh et al. | 2020 | Overfeeding-Induced Obesity Could Cause Potential Immuno-Physiological Disorders in Rainbow Trout (Oncorhynchus mykiss) | Animals, 10(9), 1499 |
| Kim et al. | 2020 | Genome based quantification of VHSV in multiple organs of infected olive flounder (Paralichthys olivaceus) using real-time PCR | Genes & genomics 42(7), 773-777 |
| Ji et al. | 2020 | A novel peptide oligomer of bacitracin induces M1 macrophage polarization by facilitating Ca2+ influx | Nutrients 12(6), 1603 |
| Ho et al. | 2020 | Effect of blue light emitting diode on viral hemorrhagic septicemia in olive flounder (Paralichthys olivaceus) | Aquaculture 521, 735019 |
| Kim et al. | 2020 | Co-expression network analysis of spleen transcriptome in rock bream (Oplegnathus fasciatus) naturally infected with rock bream iridovirus (RBIV) | International Journal of Molecular Sciences, 21(5), 1707 |
| Im et al. | 2020 | Expression analysis of LTR-derived miR-1269a and target gene, KSR2 in Sebastes schlegelii | Genes & genomics, 42(1), 55-65 |
| Roh et al. | 2020 | Changes in hematoserological profiles and leukocyte redistribution in rainbow trout (Oncorhynchus mykiss) under progressive hypoxia | Journal of fish pathology, 33(1), 23-34 |
Fish disease prevention lab